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  • Genomic Resources for Zebrafish
Title: Genomic Resources for Zebrafish  
Author: Jonathan Knight Mar 23, 2015
Last Changed by: Doug Howe Jan 23, 2019
Tiny Link: (useful for email) https://wiki.zfin.org/x/jamoBQ
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Incoming Links
General Information (1)
    Page: ZFIN Linked Pages
Hierarchy
Parent Page
    Page: ZFIN Linked Pages
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Time Editor  
Jan 23, 2019 11:44 Doug Howe View Changes
Jan 23, 2019 11:44 Doug Howe View Changes
Feb 05, 2018 15:02 Anne Eagle View Changes
updated webdriver links
Dec 06, 2017 15:46 Doug Howe View Changes
Updated vega section to reflect no more vega blast and removed specific roles played by ZFIN and Sanger, as those roles are now changing.
Aug 24, 2017 11:53 Jonathan Knight  
Outgoing Links
External Links (68)
    web.mit.edu/hopkins/
    www.wikipathways.org/index.php/WikiPathways
    vega.sanger.ac.uk/Danio_rerio/
    www.e-talen.org/E-TALEN/
    www.ncbi.nlm.nih.gov/pubmed/25813542
    danio.mgh.harvard.edu/chrMarkers/zfssr.html
    https://biodb.swu.edu.cn/qprimerdb
    zebrafish.org/
    zfrhmaps.tch.harvard.edu/zgMap/
    lawsonlab.umassmed.edu/
    research.nhgri.nih.gov/CRISPRz/
    www.ensembl.org/Multi/blastview?species=Danio_rerio
    microarray.no/
    zebrafish.genomes.nl/tomoseq/
    www.sanger.ac.uk/Projects/D_rerio/WebFPC/zebrafish/small.sh…
    genome.igib.res.in/
    www.ezrc.kit.edu/
    danio.mgh.harvard.edu/bacmarkers/ssr.html
    www.ncbi.nlm.nih.gov/genome/guide/zebrafish/index.html
    www.fliptrap.org/
    https://medschool.vanderbilt.edu/chaz-hong-lab
    www.morpholinodatabase.org/
    www.sanger.ac.uk/Projects/D_rerio/fishmask.shtml
    www.ensembl.org/Danio_rerio/Info/Index
    genome.ucsc.edu/cgi-bin/hgGateway?hgsid=85282730&clade=vert…
    www.sanger.ac.uk/Projects/D_rerio/zmp/
    www.e-crisp.org/E-CRISP/designcrispr.html
    www.ensembl.org/biomart/martview?species=Danio_rerio
    lawsonlab.umassmed.edu/PDFs/B1HStart.pdf
    pgfe.umassmed.edu/ZFPsearch.html
    crispr.mit.edu/
    zfin.org/cgi-bin/ZFIN_jump?record=JUMPTOREFCROSS
    zfin.org/zf_info/catch/Zebrafish_disease_project.pdf
    www.sanger.ac.uk/cgi-bin/humpub/chromoview
    snpfisher.nichd.nih.gov/snpfisher/snpfisher.html
    zfin.org/ZDB-PUB-080527-25
    zfishbook.org/
    www.talendesign.com/
    www.sanger.ac.uk/Projects/D_rerio/clones.shtml
    research.nhgri.nih.gov/ZInC/
    www.openbiosystems.com/GeneExpression/Non-Mammalian/Fish/Ze…
    www.wikipathways.org/index.php/Help:WikiPathways_Webservice
    microrna.sanger.ac.uk/
    www.ensembl.org/Danio_rerio/
    engertlab.fas.harvard.edu:3000/#/home
    www.zf-health.org/workpackages/wp4.html
    www.sanger.ac.uk/cgi-bin/blast/submitblast/d_rerio
    zfblast1.danio.tchlab.org/compGenomics.htm
    kawakami.lab.nig.ac.jp/ztrap/
    www.sanger.ac.uk/Projects/D_rerio/wgs.shtml
    zfin.org/cgi-bin/ZFIN_jump?record=ZDB-PUB-040708-1
    wwwmap.tuebingen.mpg.de/
    en.zfish.cn/
    www.bionity.com/en/associations/26611/norwegian-microarray-…
    zgc.nci.nih.gov/
    compbio.dfci.harvard.edu/tgi/
    www.addgene.org/
    www.ncbi.nlm.nih.gov/pubmed/18332042?dopt=Abstract
    danio.mgh.harvard.edu/blast/blast.html
    www.sanger.ac.uk/resources/zebrafish/genomeproject.html
    www.genoscope.cns.fr/zie/
    lawsonlab.umassmed.edu/PDFs/B1Hrec.pdf
    crezoo.crt-dresden.de/crezoo/
    science.nichd.nih.gov/confluence/display/burgess/Brain+Brow…
    zfin.org/zf_info/catch/moqc.pdf
    https://my.vanderbilt.edu/chemicalphenomics
    labs.umassmed.edu/WolfeLab
    www.rgenome.net/cas-offinder