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Comment: Updated vega section to reflect no more vega blast and removed specific roles played by ZFIN and Sanger, as those roles are now changing.

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Chemical Phenomics Initiative

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Chemical Phenomics Initiative

https://my.vanderbilt.edu/chemicalphenomics

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    • manually annotated genes with poly A features
    • protein feature and domain annotation
    • Blast searches against all zebrafish ESTs, cDNAs and the WashU and IMCB EST cluster
    • Blast searches against all vertebrate proteins, cDNAs and ESTs
    • mapping of unists markers
    • ab initio gene predictions
    • tRNA prediction
    • CpG island prediction and repeat masking

You can search Vega with BLAT. For Blast searches against all finished and unfinished clones go here.
The manual annotation is a joint effort between the Sanger Institute (gene structure annotation) and ZFIN (nomenclature).

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