Bulk Segregant Markers
This page represents a portion of the MGH/CVRC Zebrafish Server content, originally hosted at http://zebrafish.mgh.harvard.edu.
Bulk Segregant Markers
These markers are suggested for first-pass mapping.
Marker Display Format
Bulk Segregant Protocols
Bulk Segregant Marker List
marker_id |
linkage_group |
map_position |
|---|---|---|
1 |
3.5 |
|
1 |
13.4 |
|
1 |
24.3 |
|
1 |
32.6 |
|
1 |
39 |
|
1 |
51 |
|
1 |
61.4 |
|
1 |
72.6 |
|
1 |
77.7 |
|
1 |
85.1 |
|
2 |
4.9 |
|
2 |
24.8 |
|
2 |
38.3 |
|
2 |
44.3 |
|
2 |
58.2 |
|
2 |
68.7 |
|
2 |
81.5 |
|
2 |
86.2 |
|
3 |
17.6 |
|
3 |
30.5 |
|
3 |
45.4 |
|
3 |
59.6 |
|
3 |
64.9 |
|
3 |
78.2 |
|
3 |
100.6 |
|
3 |
108.7 |
|
3 |
116.9 |
|
4 |
9.3 |
|
4 |
15.6 |
|
4 |
26 |
|
4 |
36.7 |
|
4 |
42.6 |
|
4 |
44.9 |
|
4 |
61.6 |
|
4 |
75.7 |
|
5 |
3.5 |
|
5 |
17.1 |
|
5 |
28.2 |
|
5 |
40.9 |
|
5 |
50.3 |
|
5 |
60.9 |
|
5 |
72.7 |
|
5 |
83.1 |
|
5 |
96 |
|
5 |
103 |
|
6 |
3.5 |
|
6 |
14.5 |
|
6 |
25.2 |
|
6 |
39.5 |
|
6 |
53.6 |
|
6 |
67.9 |
|
6 |
81.1 |
|
6 |
89.3 |
|
7 |
1.9 |
|
7 |
8.9 |
|
7 |
24 |
|
7 |
36.7 |
|
7 |
52.2 |
|
7 |
60.6 |
|
7 |
70.5 |
|
7 |
83.7 |
|
7 |
98.3 |
|
8 |
4.9 |
|
8 |
18.2 |
|
8 |
30.5 |
|
8 |
39.9 |
|
8 |
49.3 |
|
8 |
62.3 |
|
8 |
79.3 |
|
8 |
100.7 |
|
9 |
4.8 |
|
9 |
14.3 |
|
9 |
23.6 |
|
9 |
37.1 |
|
9 |
48.8 |
|
9 |
70.1 |
|
9 |
86.7 |
|
9 |
94.9 |
|
10 |
0 |
|
10 |
4.7 |
|
10 |
13.4 |
|
10 |
27.9 |
|
10 |
48.7 |
|
10 |
58.1 |
|
10 |
66.2 |
|
10 |
78.3 |
|
10 |
92.5 |
|
11 |
0 |
|
11 |
8.6 |
|
11 |
22.6 |
|
11 |
24 |
|
11 |
36.9 |
|
11 |
47.9 |
|
11 |
56.6 |
|
11 |
65.9 |
|
11 |
73.1 |
|
12 |
1.3 |
|
12 |
6.3 |
|
12 |
22.3 |
|
12 |
30.4 |
|
12 |
41 |
|
12 |
51.5 |
|
12 |
62 |
|
12 |
69.1 |
|
12 |
78.7 |
|
13 |
6.2 |
|
13 |
21.8 |
|
13 |
25.2 |
|
13 |
40 |
|
13 |
51.5 |
|
13 |
57.3 |
|
13 |
80.7 |
|
14 |
4.2 |
|
14 |
13.9 |
|
14 |
23.3 |
|
14 |
36.5 |
|
14 |
51.7 |
|
14 |
62.5 |
|
14 |
82 |
|
14 |
93.8 |
|
15 |
7.3 |
|
15 |
18.9 |
|
15 |
34.1 |
|
15 |
49.3 |
|
15 |
57.9 |
|
15 |
67.4 |
|
15 |
79.6 |
|
15 |
87.5 |
|
15 |
98.2 |
|
16 |
4.8 |
|
16 |
15 |
|
16 |
27.7 |
|
16 |
34.9 |
|
16 |
43.4 |
|
16 |
50.6 |
|
16 |
59 |
|
16 |
67.2 |
|
16 |
78.9 |
|
17 |
5.9 |
|
17 |
20 |
|
17 |
33.5 |
|
17 |
44.5 |
|
17 |
53.4 |
|
17 |
68.1 |
|
17 |
81.1 |
|
17 |
85.8 |
|
18 |
7.3 |
|
18 |
14.6 |
|
18 |
21.5 |
|
18 |
35.5 |
|
18 |
43.4 |
|
18 |
52.4 |
|
18 |
62 |
|
18 |
75.4 |
|
19 |
1.1 |
|
19 |
9.5 |
|
19 |
19.1 |
|
19 |
26 |
|
19 |
38.3 |
|
19 |
48.8 |
|
19 |
59.4 |
|
19 |
69.1 |
|
19 |
81.5 |
|
20 |
7.9 |
|
20 |
21.2 |
|
20 |
30.6 |
|
20 |
38.9 |
|
20 |
55.7 |
|
20 |
67.5 |
|
20 |
77.8 |
|
20 |
92.3 |
|
20 |
107.2 |
|
20 |
117.1 |
|
21 |
3.7 |
|
21 |
13.8 |
|
21 |
21.9 |
|
21 |
35 |
|
21 |
40.8 |
|
21 |
49.4 |
|
21 |
110 |
|
21 |
120.5 |
|
21 |
129.7 |
|
22 |
0 |
|
22 |
6.8 |
|
22 |
17.2 |
|
22 |
26.7 |
|
22 |
35 |
|
22 |
55.8 |
|
22 |
59.2 |
|
22 |
68.6 |
|
23 |
1.1 |
|
23 |
9.4 |
|
23 |
16.6 |
|
23 |
30.5 |
|
23 |
36.6 |
|
23 |
46 |
|
23 |
54.4 |
|
23 |
60.1 |
|
24 |
1.2 |
|
24 |
2.5 |
|
24 |
16.6 |
|
24 |
36 |
|
24 |
53.5 |
|
24 |
62.9 |
|
24 |
73.3 |
|
24 |
76.9 |
|
25 |
5.1 |
|
25 |
9.8 |
|
25 |
28.2 |
|
25 |
40.3 |
|
25 |
48.5 |
|
25 |
59.9 |
|
25 |
65.7 |
|
25 |
71.7 |
= 214 markers
STS Markers for Bulk Segregant Analysis
These tables show the markers currently being used for bulk segregant analysis. Plain numbers refer to "Z markers".
Plate 1 (lg1-lg14)
|
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
A |
22347 |
6283 |
6802 |
9920 |
20533 |
1525 |
1052 |
6867 |
22270 |
8032 |
10727 |
1400 |
B |
9704 |
1351 |
6974 |
11496 |
8921 |
6614 |
11001 |
4956 |
8770 |
10225 |
8450 |
22103 |
C |
5508 |
3705 |
6818 |
20915 |
5538 |
22250 |
7564 |
10789 |
4168 |
1473 |
6920 |
4568 |
D |
7358 |
13521 |
13475 |
4299 |
1454 |
1701 |
4673 |
6268 |
10130 |
5643 |
9951 |
6104 |
E |
13620 |
22747 |
1185 |
880 |
10914 |
11919 |
14193 |
13219 |
11911 |
6259 |
17223 |
6657 |
F |
3439 |
9257 |
10934 |
13614 |
9230 |
10785 |
3835 |
8146 |
7262 |
4252 |
5436 |
3259 |
G |
17222 |
7486 |
20317 |
8252 |
10441 |
1059 |
9208 |
3362 |
13411 |
5435 |
1257 |
|
H |
20450 |
11250 |
6908 |
8156 |
1239 |
13880 |
6909 |
13395 |
4353 |
9366 |
6666 |
|
Plate 2 (lg15-lg25)
|
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
A |
7216 |
7381 |
13230 |
11944 |
7654 |
5183 |
9516 |
3093 |
13223 |
|
|
|
B |
21165 |
6895 |
21982 |
9384 |
7686 |
3816 |
10321 |
9084 |
3286 |
|
|
|
C |
gof18 |
15453 |
6984 |
3782 |
4825 |
4374 |
6376 |
4003 |
20039 |
|
|
|
D |
8731 |
3104 |
6921 |
8554 |
7171 |
20046 |
5141 |
6017 |
10949 |
|
|
|
E |
9881 |
13202 |
381 |
3211 |
3824 |
10056 |
5075 |
5413 |
23011 |
|
|
|
F |
9692 |
21703 |
3165 |
9334 |
9708 |
1497 |
13229 |
9325 |
20051 |
|
|
|
G |
22674 |
6454 |
9941 |
gof16 |
4425 |
10432 |
11092 |
13232 |
8224 |
|
|
|
H |
8343 |
20605 |
8488 |
6089 |
7925 |
7405 |
3528 |
1213 |
8780 |
|
|
|
Plate 3 (telomeric markers, all but lg13)* arranged for analysis of 1 pool (lg15-lg25)
|
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
A |
13296 |
4593 |
15410 |
4278 |
3929 |
3100 |
3275 |
10983 |
3314 |
1813 |
15448 |
gof2 |
B |
191 |
8218 |
8703 |
20106 |
13221 |
20860 |
6754 |
6427 |
3952 |
11160 |
1312 |
7576 |
C |
1523 |
11837 |
5223 |
9041 |
3126 |
1642 |
1928 |
6010 |
6572 |
11685 |
1651 |
1625 |
D |
22144 |
6804 |
10508 |
13719 |
11752 |
4682 |
5683 |
20133 |
7627 |
11862 |
6924 |
1431 |
E |
|
|
|
|
|
|
|
|
|
|
|
|
F |
|
|
|
|
|
|
|
|
|
|
|
|
G |
|
|
|
|
|
|
|
|
|
|
|
|
H |
|
|
|
|
|
|
|
|
|
|
|
|